I can't help with the specifics on integrating the bare minimum components for the stock ECU to work, but if it were me, I'd skip the Toyota ECU altogether. There are simply too many decent choices for basic and straight-forward ECUs on the market for me to put any effort into using the Toyota unit. For example; wanna buy my Haltech E6K for $150? Already comes with a base calibration that'll run a 2JZ. Or a Microsquirt. Or a Speeduino. You get the point.
Regarding fuel system:
You're not gonna need much of a pump at all if you have no ability to load the engine up with a brake. Rather than getting a more expensive high-flow inline pump, why not just use any old in-tank pump, hose-clamp it to a stick and drop it down into a gascan...or similar...you get the idea.
I pondered my own E85 fuel filter situation after I installed the Hellcat pump into my OEM hanger - because I had to eliminate the built-in filter it had. The companies that sell fancy fuel filters all say you need to pay a bunch of money for their fancy E85 fuel filters...and that cellulose isn't suitable for E85... Ok, then why do all the OEM flex-fuel cars come with cellulose elements? I chose the most commonly available, generic WIX filter I could find - that came as original equipment on lots and lots of flex fuel production cars. I went with the WIX 33595. They cost about $10. They have the SAE quick-connect inlet/outlet, so you'd still need to buy fittings to hook up to it.
To hook your fuel system to the rail - I'd just use the standard banjo connection the fuel rail is ready for.
What is your intention/vision for this run-stand? Without a brake (and all the peripheral stuff that entails), all you can do is idle and free-rev. You'll only be able to touch about 5% of the operating envelope of the engine.
Regarding fuel system:
You're not gonna need much of a pump at all if you have no ability to load the engine up with a brake. Rather than getting a more expensive high-flow inline pump, why not just use any old in-tank pump, hose-clamp it to a stick and drop it down into a gascan...or similar...you get the idea.
I pondered my own E85 fuel filter situation after I installed the Hellcat pump into my OEM hanger - because I had to eliminate the built-in filter it had. The companies that sell fancy fuel filters all say you need to pay a bunch of money for their fancy E85 fuel filters...and that cellulose isn't suitable for E85... Ok, then why do all the OEM flex-fuel cars come with cellulose elements? I chose the most commonly available, generic WIX filter I could find - that came as original equipment on lots and lots of flex fuel production cars. I went with the WIX 33595. They cost about $10. They have the SAE quick-connect inlet/outlet, so you'd still need to buy fittings to hook up to it.
To hook your fuel system to the rail - I'd just use the standard banjo connection the fuel rail is ready for.
What is your intention/vision for this run-stand? Without a brake (and all the peripheral stuff that entails), all you can do is idle and free-rev. You'll only be able to touch about 5% of the operating envelope of the engine.